Poster Session

* denotes the technical presentation of a Grand Challenge contender
Bioinformatics
Number Title Presenter Authors
1 Feedback Effects of Extracellular Matrix Composition on AMPRK Signaling Pathway: Pathway to Novel Drug Therapeutics Targeting Atherosclerosis Prashanthi Vandrangi Prashanthi Vandrangi, JYJ Shyy, and V. G. J. Rodgers
2 Pathway-based Diagnostic Biomarker Identification for Post-Traumatic Stress Disorder Ruoting Yang Ruoting Yang, Bernie J Daigle Jr, Linda R Petzold, Francis J. Doyle III
3 Mining Significant Chemical Substructures in 2D and 3D Spaces Sayan Ranu Sayan Ranu, Ambuj K. Singh
Biomaterials
Number Title Presenter Authors
4 The effect of genipin crosslinking on the micro- and nano- structure of collagen hydrogels Yu-Jer Hwang Yu-Jer Hwang; Tatiana Krasieva; Julia Lyubovitsky
5 Single-Molecule Manipulation Experiments Reveal the Onset of Excluded Volume in Poly(Ethylene Glycol) Andrew Dittmore Andrew Dittmore, Dustin B. McIntosh, Omar A. Saleh
6 Relationship between membrane disruption and cationic and hydrophobic content in synthetic antimicrobials David Kuo David Kuo, Nathan W. Schmidt, Ghee Hwee Lai, Abhijit Mishra, Gerard Wong
7 Interactions of Apo A-I peptide analogs with HDL lipids to investigate the effect of ?-helices on membrane rearrangement Michelle Lee Nathan W. Schmidt, Michelle Lee, Gerard C.L. Wong
8 Fluid Mechanical Shear Induces Structural Transitions in Assembly of a Peptide-Lipid Conjugate Katie Megley Katie Megley, Won Hyuk Suh, Tomoko Shimada, and Matthew Tirrell
9 Bio-inspired energy dispersive materials: Modifications and mechanical testing of a thiol-ene system Luke A. Miller L.A. Miller, J. Bernal Ostos, R.G. Rinaldi, A.J. Jacobsen, F.W. Zok, G.D. Stucky
10 Complex coacervation of aqueous polypeptide solutions with potential for biological application Dimitrios Priftis Dimitrios Priftis, Katie Megley, Matthew Tirrell
11 The molecular mechanism of HUVEC proliferation on substrata with different rigidities: Roles of Src and RhoA Yi-Ting Yeh Yi-Ting Yeh, Yi-Shuan Li, Shu Chien
Biomechanics & Biophysics
Number Title Presenter Authors
12 Dynamics of a microsphere in an anisotropic gel: a frontier in intracellular microrheology Manuel Gomez-Gonzalez Manuel Gomez-Gonzalez, Kathryn Osterday and Juan C. del Alamo
13 Engineering a Microbial Proton Pump Scaffold to Study Receptor Function and Conformational Dynamics Sunyia Hussain Sunyia Hussain, Song-i Han
14 Cholesterol Concentration Modulates the Mechanical Properties of Cellular Plasma Membranes Nima Khatibzadeh Nima Khatibzadeh, Sharad Gupta, Brenda Farrell, William E. Brownell, and Bahman Anvari
15 Unraveling the Assembly of a Solar-Powered Membrane Protein Using Advanced Electron Spin Resonance Tools Katherine Stone Jeda Voska, Maia Kinnebrew, Songi Han
16 Cooperativity between integrins CD11c/CD18 and VLA-4 supports monocyte arrest on VCAM-1 Greg Foster Greg A. Foster, Robert M. Gower, Scott I. Simon
17 Charge Effects on the Fibril-forming Peptide KTVIIE: a Two-dimensional Replica Exchange Simulation Study Joohyun Jeon Joohyun Jeon, M. Scott Shell
18 Rotational Particle Tracking of Brownian Polygons by Optical Fourier Transform Microscopy Kenny Mayoral Kenny Mayoral, Terry P. Kennair, Xiaoming Zhu, James Milazzo, Kathy Ngo, Michael M. Fryd, and Thomas G. Mason
19 Study of ?-lactam Resistance in Streptococcus pneumonia using Molecular Dynamics Simulations of Penicillin-Binding Protein 1a Noriko Uka Sausman Noriko Uka Sausman, Phanourios Tamamis, Ronald Gorham, Neal Schiller, and Dimitrios Morikis
20 Two distinct mechanisms of polymer-enhanced lung surfactant adsorption Ian C. Shieh Ian C. Shieh, Joseph A. Zasadzinski
21 Flow Regulation of miRNAs in Endothelial Functions Kuei-Chun Wang Kuei-Chun Wang, Jing Zhou, Yi-Shuan Li, Shu Chien
22 Direct correlation between creep compliance and deformation in nonaffine entangled and crosslinked microtubule networks Yali Yang Yali Yang, Jun Lin, Bugra Kaytanli, Omar Saleh, Megan T. Valentine
Biomedical Devices
Number Title Presenter Authors
23 Development of a Novel Device for the Direct Reversal and Treatment of Cerebral Edema: Enhancing the Survivability of Water Intoxicated Murine Devin McBride Devin W. McBride, Mike S. Hsu, B. Hyle Park, Devin K. Binder, and V. G. J. Rodgers
24 Ultra-Low Power Fully Integrated Wireless Front-End Biosensor For Patient Tracking And Data-Logging Star Li Simon Bill, Alvin Fong, Star Li, Blayne Tolleson, Luke Theogarajan
25 Development of a cold block for switchable activation/deactivation of action potential propagation Md. Rezuanul Haque Md. Rezuanul Haque, Md. Shahidul Islam, Christian M. Oh, B. Hyle Park
26 Facilitating Genomic Library Preparation for Next-Generation Sequencing Platforms Aric Joneja Aric Joneja
27 Subthreshold CMOS Synapse Arrays with Log-domain Conductance-based Dynamics Theodore Yu Theodore Yu, Siddharth Joshi, Venkat Rangan, Gert Cauwenberghs
Biosensors
Number Title Presenter Authors
28 Rapid, on-chip, eletrochemical detection of Salmonella Adriana S. Patterson Brian S. Ferguson, H. Tom Soh, Kevin W. Plaxco
29 Active transcription factor quantification in cell extract with electrochemical, structure-switching biosensors Andrew J. Bonham Andrew J. Bonham, Kevin W. Plaxco
30 Discovery and Characterization of Antibody Biomarkers of Autoimmune Diseases and Reagents for Their Detection Serra E. Elliott Serra E. Elliott, Patrick S. Daugherty
31 Neuromorphic Neural Interfaces Siddharth Joshi Siddharth Joshi, Abraham Akinin, Massoud Khraiche, Gert Cauwenberghs
32 Versatile E-DNA Scaffold Sensor For The Rapid, Quantitative Detection Of Antibodies Hannah M. Kallewaard Hannah M. Kallewaard, Ryan J. White, Kevin W. Plaxco
33 3-D Silicon Retina Modeling Spatiotemporal Dynamics of Ganglion Cells Jongkil Park Jongkil Park, Sohmyung Ha, and Gert Cauwenberghs
34 Oriented Attachment of Cytochrome P450 Enzymes: Implications for Biosensor Development Elizabeth Schneider Elizabeth Schneider, Douglas S. Clark
35 Development of FRET-based high-throughput screening to discover small chemical inhibitors of the SUMOylation pathway Yang Song Yang Song, Vipul Madahar, Yan Liu, Jiayu Liao
36 Serum Antibody Profiling of Celiac Disease Using Bacterial Display for in vitro Diagnostics Bradley Spatola Bradley N. Spatola, Patrick S. Daugherty
Drug Delivery
Number Title Presenter Authors
37 Peptide Modified Nanoparticles for Diagnosis and Treatment of Atherosclerosis Laurie Drews Laurie B. Drews, Laura R. Croft, Steven M. Conolly, Matthew V. Tirrell
38 Polymeric ‘Backpacks’ for Attachment to Immune System Cells Jonathan Gilbert Jonathan Gilbert, Albert Swiston, Nishit Doshi, Samir Mitragotri, Darrell Irvine, Robert Cohen, Michael Rubner
39 Intracellular segregation of microparticles Poornima Kolhar Poormima kolhar, Samir mitragotri
40 Safe polymeric needles for intracellular delivery Poornima kolhar Poornima kolhar, Nishit doshi, Samir mitragotri
41 Selective targeting of tumor stem cells using conditionally-activated antibodies Tobias Schoep Oran Erster, Tobias D. Schoep, Patrick S. Daughert
42 Improving Gene Delivery Using a Transferrin Variant Conjugated to Polyethyleneimine Chong T. Ying Chong T. Ying, Ricky Y.T. Chiu, Devin S. Quinlan, Anne B. Mason, Daniel T. Kamei
43 BMP2 Delivery and Osteoblast Growth in a Perfusion Bioreactor: A Modelbased Simulation Argus Sun Argus Sun, Elsa B Murray, Samuel Murray
Imaging
Number Title Presenter Authors
44 Cellular Uptake of Optical Viral Ghosts by Human Spleen Macrophages and Hepatocytes in-vitro Yadir Guerrero Yadir Guerrero, Sharad Gupta, Baharak Bahmani, A.L.N. Rao, Bahman Anvari
45 High-speed spectral-domain polarization-sensitive optical coherence tomography system at 1300nm Yan Wang Yan Wang, Christian Oh, Md Shahidul Islam, Mike Oliveira, Md Rezuanul Haque, Carissa Reynolds, Melissa Eberle, Hyle Park
46 Large-area CMOS position-sensitive solid-state photomultipliers for high resolution multimodality PET/MR imaging * Jeffrey Schmall Jeffrey Schmall, Emilie Roncali, Mickel McClish, Purushottam Dokhale, Kanai Shah, Simon Cherry
47 High-throughput Microscopy for Cardiac Function Characterization in the Developing Zebrafish Jungho Ohn Jungho Ohn, Michael Liebling
48 Magnetic particle imaging: new imaging modality for cancer detection, stem cell tracking, and cardiac angiography Laura R. Croft Laura R. Croft, Patrick Goodwill, Justin Konkle, Kuan Lu, Emine Saritas, Arbi Tamrazian, Bo Zheng, and Steven Conolly
49 Imaging Cerebral Edema Using Optical Coherence Tomography Melissa Eberle Carissa Reynolds, Melissa Eberle, Mike Hsu, Yan Wang, Christian Oh, Devin Binder, Hyle Park
50 Development of an all-optical, ultra fast time- gated Raman instrument for biomedical applications Florian Knorr Zachary J. Smith, Sebastian Wachsmann-Hogiu
51 Non-Invasive Assessment of Renal Tumor Aggressiveness using Hyperpolarized Carbon-13 Magnetic Resonance Bertram Koelsch Bertram L. Koelsch, Kayvan R. Keshari, Rahwa Iman, Renuka Sriram, Zhen Wang, John Kurhanewicz
52 Speckle reduction in optical coherence tomography images by use of a deformable mirror Carissa Reynolds Christian M. Oh, Arthur Ortega, M. Shahidul Islam, Yan Wang, Rezuanul Haque, Michael Oliveira, Carissa Reynolds, Melissa Eberle, B. Hyle Park
53 Quantitative Polarized Light Microscopy of Human Articular Cartilage: Technique Description and Error Analysis Emily Schoenhoff Emily Schoenhoff, Albert Chen, Christopher Raub, Robert Sah
54 Accelerated Metabolic Imaging: Application of L1-SPIRiT to Hyperpolarized 13C Parallel Imaging and Compressed Sensing MRSI Peter Shin Peter Shin, Michael Ohliger, Simon Hu, Peder Larson, Cornelius Von Morze, Michael Lustig, Daniel Vigneron
55 Videobioinformatics Tracking of Calcification in Osteogenic Cultures derived from Human Pluripotent Stem Cells Nicole zur Nieden Ivann K.C. Martinez, Cristina Soto, Beatrice Kuske, Bir Bhanu, Nicole I. zur Nieden
Metabolic Engineering
Number Title Presenter Authors
56 Engineering the Type III Secretion System for Improved Heterologous Protein Expression Anum Azam Anum Azam, Kevin Metcalf, Danielle Tullman-Ercek
57 Engineered Bacterial Efflux Pumps for Production of Biofuels Sergey Boyarskiy Sergey Boyarskiy, Michael A. Fisher, Danielle Tullman-Ercek
58 A Synthetic Genetically-Encoded Cell State Controller Felix Moser Felix Moser, Christopher Voigt
Modeling
Number Title Presenter Authors
59 Non-equilibrium fluctuations of cell membranes: The effect of cytoskeletal motor activity on membrane dynamics Roie Shlomovitz Roie Shlomovitz, Alex Levine
60 Hamiltonian potentials to investigate energy transduction in nano-scale kinesin motors Gunjan Thakur Gunjan S Thakur, Megan Valentine, Igor Mezic
61 Robust filament tracking and spectral analysis techniques to determine bending stiffness of uniform and heterogeneous biopolymers David Valdman, Dezhi Yu David Valdman, Dezhi Yu, Paul Atzberger, Megan Valentine
62 Modeling Interactions in Circadian Neurons and Peripheral Clocks Bharath Ananthasubramaniam and Panagiota T. Foteinou Bharath Ananthasubramaniam, Panagiota T. Foteinou, Sungwon An, Erik Herzog, Francis J. Doyle III
63 Dynamical analysis of the stress-induced heat-shock protein network in post-traumatic stress disorder (PTSD) K. Sriram K. Sriram and Francis J. Doyle
64 A Phase Field Model for Supported Lipid Bilayer Formation Using Adaptive Mesh Refinement Patrick Plunkett Patrick Plunkett, Paul Atzberger, Kim Weirich, Deborah Fygenson
65 Effective stiffness of lipid bilayer membranes with protein inclusions Jon Karl Sigurdsson Jon K. Sigurdsson, Paul J. Atzberger, Frank L. H. Brown
66 Advanced Global Optimization and Sensitivity Techniques for Analyzing Deterministic Circadian Models Peter St. John Peter St. John, Maria Rodriguez-Fernandez, and Francis J. Doyle III
Nanobiotechnology
Number Title Presenter Authors
68 Imaging to assess effects of particulate matter in normal and asthmatic subjects Andrew Bluhm Andrew Bluhm, Heather Palko, Angelique Louie
Stem Cell Engineering
Number Title Presenter Authors
69 Functional Characterization of Embryonic Stem Cell-Derived Endothelial Cells Drew Elizabeth Glaser Drew E. Glaser, Robert M. Gower, Nicholas E. Lauer, Kayan Tam, Alicia A. Blancas, Albert J. Shih, Scott I. Simon, and Kara E. McCloskey
70 3D Shear Stress Microenvironments Alter Embryonic Stem Cell Osteogenic Differentiation through Modulation of CatnB Tiffany Satoorian Susanne Trettner, Tiffany S. Satoorian, Elias Ali, Kevin C. Keller, Beatrice Kuske, Nicole I. zur Nieden
71 Stem Cell Toxicity Testing with a Modularized Microfluidic High Throughput Chemical Screening (MMHTCS) System Douglas Hill Douglas Hill,
72 Endothelial Colony Forming Cells Retain their Vessel Forming Capacity Following Lentiviral Transduction Martin Decaris Martin Decaris, Chang Lee, Jiawei He, Alice Tarantal, Kent Leach
73 Differentiation of Human Pluripotent Stem Cells to Retinal Pigmented Epithelium using Purified Extracellular Matrix Proteins Teisha J. Rowland Teisha J. Rowland, Alison J. Blaschke, David E. Buchholz, Sherry T. Hikita, Lincoln V. Johnson, Dennis O. Clegg
Tissue Engineering
Number Title Presenter Authors
74 Evaluation of a Chondroitinase-ABC Dosing Regimen for Optimizing Engineered TMJ Fibrocartilage Regina F. MacBarb Regina F. MacBarb, Kyriacos A. Athanasiou
75 Enhancing Cell Viability via Rational Cell Distribution to Minimize Oxygen Diffusion-Consumption Limitations Erik Reinertsen Erik Reinertsen, Benjamin M. Wu, DDS, PhD
Number Title Presenter Authors
76 Cytotoxicity of Silicon Nanoparticles in Hepatocytes Sara Schneider
* denotes the technical presentation of a Grand Challenge contender
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